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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015951645.1_cds_XP_016491614.1_81911
CDS Infomation

[gene=LOC107811239] [db_xref=GeneID:107811239] [protein=LL-diaminopimelate aminotransferase, chloroplastic-like] [protein_id=XP_016491614.1] [location=complement(join(6290..6583,6689..6895,8159..8479,8825..8875,8973..9077,12131..12193,12565..12681,13118..13185,13817..13890,14773..14855))] [gbkey=CDS]
Sequence

ATGGCACATATTCAGCAAAGTCTTTCCACTTCAATCTCTTCATCAACTTCTACTTTAATG
GATCAGCACAAACTCCGTCTCAGGAGCCAGAATGTGTCATTGCCAGGCAAAACCGGTGGT
ATTGTCAGATGTGTTGCAACACCCTCTACGGAGACTTCTTCCAAAACAAAGGTCTCTCGC
AATGAGAACTTGGCTAAACTTCAAGCTGGTTACCTTTTTCCTGAGATCGCAAGAAGGAGA
TCTGCACACATGTTGAAACACCCTGATGCTCAAATTATAAGCCTTGGAATTGGTGACACT
ACTGAGCCCATTCCTGAATTCATAAGTTCTGCCATGGCACAGAGAGCACATGACCTGTCA
ACATTAAAGGGTTACAGTGGTTATGGTGCTGAGCAAGGAGAAAAACAACTTAGAGCCTCC
ATTGCTTCTACCTTTTATGCAAATGTTGGAATAGAGGAAGATGAGATCTTCGTCTCTGAT
GGTGCCAAAAGTGATATATCTCGGCTTCAGGTTCTTTTTGGGTCTAATGTCACTATGGCT
GTGCAAGACCCATCGTATCCGGCTTATGTGGATTCAAGTGTTATTATGGGCCAAACTGGT
CAGTTTCAGAAGGATGTGGAGAAGTATGGGAGTATTGCATACATGAGATGTACTCCAGAA
AACGGGTTCTTTCCTGATTTATCCAGTGTTCCTCGGACAGATATTATATTTTTCTGTTCG
CCTAATAATCCAACTGGTGCTGCGGCATCAAGGGAGCAGCTGACTAAATTGGTGCATTTT
GCTAAAAACAATGGCTCAATCCTTGTTTATGATTCTGCATATGCAATGTATATATGTGAT
GACAGTCCAAAGTCCATCTTTGAGATTCCTGGAGCCAAAGAGGTTGCCATTGAGGTTTCA
TCGTTTTCGAAGTATGCTGGGTTCACTGGAGTTCGTTTAGGGTGGACTGCAATTCCCAAA
GCACTCCTATATTCTGATGGATTTCCTGTAGCAAAAGACTTCAATCGCATTGTTTGTACA
AGCTTCAATGGTGCATCCAATATCGCTCAAGCTGGCGGTCTGGCTTGCCTTTCACCTGAT
GGTTTCAAGGCCATGAAGAACGTGGTTAGTTTCTATAAAGAAAACACAGAAATCATAATG
GAGACATTTAAGTCGCTAGGTTACAAGGTGTATGGAGGTAAAAATGCACCCTACGTGTGG
GTTCACTTCCCTGGACGAAGCTCATGGGAGGTTTTCAGCGAGATACTTGAGAAGACTCAT
GTCGTTACCACACCAGGCAGTGGTTTTGGTCCTGGTGGTGAAGGTTTTGTCAGAGTAAGT
GCATTTGGGCACAGGGATAACGTCGTAGAAGCTTGCAGAAGATTCAAGGAATTGTACAAG
TGA

Peptide Sequence

PEP ID

XP_016491614.1
PEP Infomation

PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic-like [Nicotiana tabacum]
Sequence

MAHIQQSLSTSISSSTSTLMDQHKLRLRSQNVSLPGKTGGIVRCVATPSTETSSKTKVSR
NENLAKLQAGYLFPEIARRRSAHMLKHPDAQIISLGIGDTTEPIPEFISSAMAQRAHDLS
TLKGYSGYGAEQGEKQLRASIASTFYANVGIEEDEIFVSDGAKSDISRLQVLFGSNVTMA
VQDPSYPAYVDSSVIMGQTGQFQKDVEKYGSIAYMRCTPENGFFPDLSSVPRTDIIFFCS
PNNPTGAAASREQLTKLVHFAKNNGSILVYDSAYAMYICDDSPKSIFEIPGAKEVAIEVS
SFSKYAGFTGVRLGWTAIPKALLYSDGFPVAKDFNRIVCTSFNGASNIAQAGGLACLSPD
GFKAMKNVVSFYKENTEIIMETFKSLGYKVYGGKNAPYVWVHFPGRSSWEVFSEILEKTH
VVTTPGSGFGPGGEGFVRVSAFGHRDNVVEACRRFKELYK

Transcript Sequence

Gene sequence data has not been registered.